Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm4526-201ENSMUST00000186039 920 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm7946-201ENSMUST00000203326 958 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm44002-201ENSMUST00000205134 594 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PrkdcP97313 AC187103.2-201ENSMUST00000223605 1617 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm13503-201ENSMUST00000119017 446 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm15012-201ENSMUST00000119176 106 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm25713-201ENSMUST00000158625 109 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm15740-201ENSMUST00000159703 1292 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm2147-201ENSMUST00000193588 639 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PrkdcP97313 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm43121-201ENSMUST00000199065 1305 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Mir690-201ENSMUST00000102110 109 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm22269-201ENSMUST00000104002 130 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm26418-201ENSMUST00000104275 137 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Gm12252-201ENSMUST00000119517 219 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC3.41□□□□□ -1.86
PrkdcP97313 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 AC124408.1-201ENSMUST00000228938 707 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm43567-201ENSMUST00000197581 1978 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.41□□□□□ -1.86
PrkdcP97313 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PrkdcP97313 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Gm26367-201ENSMUST00000104165 132 ntBASIC3.4□□□□□ -1.86
PrkdcP97313 Gm23175-201ENSMUST00000104371 132 ntBASIC3.4□□□□□ -1.86
PrkdcP97313 Gm15263-201ENSMUST00000121556 642 ntBASIC3.4□□□□□ -1.86
PrkdcP97313 Gm22588-201ENSMUST00000157510 140 ntBASIC3.4□□□□□ -1.86
PrkdcP97313 Gm23354-201ENSMUST00000158426 104 ntBASIC3.4□□□□□ -1.86
PrkdcP97313 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Gm43157-201ENSMUST00000198223 412 ntBASIC3.4□□□□□ -1.86
PrkdcP97313 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.4□□□□□ -1.86
PrkdcP97313 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PrkdcP97313 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PrkdcP97313 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm18186-201ENSMUST00000192239 1580 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PrkdcP97313 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PrkdcP97313 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Gm24998-201ENSMUST00000157908 89 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
PrkdcP97313 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.4□□□□□ -1.87
PrkdcP97313 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.4□□□□□ -1.87
PrkdcP97313 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PrkdcP97313 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PrkdcP97313 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.87
PrkdcP97313 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PrkdcP97313 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms