Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.71□□□□□ -1.5
NcanP55066 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.71□□□□□ -1.5
NcanP55066 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.71□□□□□ -1.5
NcanP55066 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NcanP55066 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.7□□□□□ -1.5
NcanP55066 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NcanP55066 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.7□□□□□ -1.5
NcanP55066 Gm11227-201ENSMUST00000119774 471 ntBASIC5.7□□□□□ -1.5
NcanP55066 Gm16420-201ENSMUST00000120258 856 ntBASIC5.7□□□□□ -1.5
NcanP55066 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.7□□□□□ -1.5
NcanP55066 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NcanP55066 Gm4842-201ENSMUST00000183237 835 ntBASIC5.7□□□□□ -1.5
NcanP55066 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.7□□□□□ -1.5
NcanP55066 Gm43604-201ENSMUST00000199799 705 ntBASIC5.7□□□□□ -1.5
NcanP55066 Gm43418-201ENSMUST00000201334 428 ntBASIC5.7□□□□□ -1.5
NcanP55066 Gm43629-201ENSMUST00000201782 704 ntBASIC5.7□□□□□ -1.5
NcanP55066 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.7□□□□□ -1.5
NcanP55066 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Gm18205-201ENSMUST00000209215 841 ntBASIC5.7□□□□□ -1.5
NcanP55066 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.7□□□□□ -1.5
NcanP55066 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.7□□□□□ -1.5
NcanP55066 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.7□□□□□ -1.5
NcanP55066 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.7□□□□□ -1.5
NcanP55066 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NcanP55066 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.7□□□□□ -1.5
NcanP55066 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.7□□□□□ -1.5
NcanP55066 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NcanP55066 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.7□□□□□ -1.5
NcanP55066 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.7□□□□□ -1.5
NcanP55066 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
NcanP55066 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.69□□□□□ -1.5
NcanP55066 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
NcanP55066 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.69□□□□□ -1.5
NcanP55066 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NcanP55066 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Gm22266-201ENSMUST00000104011 138 ntBASIC5.69□□□□□ -1.5
NcanP55066 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
NcanP55066 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.69□□□□□ -1.5
NcanP55066 Gm22819-201ENSMUST00000157445 303 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm23082-201ENSMUST00000157852 133 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm26170-201ENSMUST00000158419 148 ntBASIC5.69□□□□□ -1.5
NcanP55066 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.69□□□□□ -1.5
NcanP55066 Mir713-201ENSMUST00000178651 108 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm5558-201ENSMUST00000178933 495 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Gm28859-201ENSMUST00000186650 616 ntBASIC5.69□□□□□ -1.5
NcanP55066 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.69□□□□□ -1.5
NcanP55066 Gm37828-201ENSMUST00000192496 432 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm37336-202ENSMUST00000193705 468 ntBASIC5.69□□□□□ -1.5
NcanP55066 Trbv27-201ENSMUST00000193711 277 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm37445-201ENSMUST00000195318 242 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm44474-201ENSMUST00000196525 127 ntBASIC5.69□□□□□ -1.5
NcanP55066 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
NcanP55066 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm5045-201ENSMUST00000027054 810 ntBASIC5.69□□□□□ -1.5
NcanP55066 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NcanP55066 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NcanP55066 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.69□□□□□ -1.5
NcanP55066 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NcanP55066 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NcanP55066 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.69□□□□□ -1.5
NcanP55066 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.68□□□□□ -1.5
NcanP55066 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
NcanP55066 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Gm28240-201ENSMUST00000187560 2053 ntBASIC5.68□□□□□ -1.5
NcanP55066 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NcanP55066 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NcanP55066 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NcanP55066 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.68□□□□□ -1.5
NcanP55066 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms