Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Sox1P53783 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Mir467h-201ENSMUST00000116759 121 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm14000-201ENSMUST00000118670 233 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm11737-201ENSMUST00000118713 468 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox1P53783 Gm15152-201ENSMUST00000121540 394 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm22478-201ENSMUST00000122570 154 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.58□□□□□ -1.36
Sox1P53783 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.58□□□□□ -1.36
Sox1P53783 Gm25667-201ENSMUST00000157701 275 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm22361-201ENSMUST00000158435 176 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox1P53783 Gm18604-201ENSMUST00000172535 558 ntBASIC6.58□□□□□ -1.36
Sox1P53783 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 S100a11-ps-201ENSMUST00000181735 306 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm28788-201ENSMUST00000189717 375 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm29558-201ENSMUST00000190134 375 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm37235-201ENSMUST00000195171 59 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm42461-201ENSMUST00000198627 1150 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm18327-201ENSMUST00000202426 830 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm18672-201ENSMUST00000208035 270 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm44754-201ENSMUST00000208155 400 ntBASIC6.58□□□□□ -1.36
Sox1P53783 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.58□□□□□ -1.36
Sox1P53783 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.58□□□□□ -1.36
Sox1P53783 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.58□□□□□ -1.36
Sox1P53783 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox1P53783 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox1P53783 AU020206-202ENSMUST00000206358 3009 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Sox1P53783 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Sox1P53783 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Sox1P53783 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Sox1P53783 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Sox1P53783 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Sox1P53783 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Sox1P53783 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.58□□□□□ -1.36
Sox1P53783 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
Sox1P53783 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox1P53783 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm38699-201ENSMUST00000221301 1740 ntBASIC6.57□□□□□ -1.36
Sox1P53783 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Sox1P53783 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Sox1P53783 Gm14756-201ENSMUST00000116395 240 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm6181-201ENSMUST00000117187 264 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox1P53783 Gm13593-201ENSMUST00000121329 692 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.57□□□□□ -1.36
Sox1P53783 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox1P53783 Gm23965-201ENSMUST00000157969 142 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm26402-201ENSMUST00000158499 113 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Mir5125-201ENSMUST00000175240 79 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm6900-201ENSMUST00000178971 342 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Sox1P53783 Gm28191-201ENSMUST00000189112 211 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Mir5121-201ENSMUST00000198528 74 ntBASIC6.57□□□□□ -1.36
Sox1P53783 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm43235-201ENSMUST00000200121 297 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.57□□□□□ -1.36
Sox1P53783 AC154426.1-201ENSMUST00000225614 1132 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox1P53783 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox1P53783 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox1P53783 Gm25147-201ENSMUST00000083030 105 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Mir133b-201ENSMUST00000083546 119 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Sox1P53783 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox1P53783 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox1P53783 Gm42967-201ENSMUST00000198647 2312 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sox1P53783 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.57□□□□□ -1.36
Sox1P53783 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.57□□□□□ -1.36
Sox1P53783 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Sox1P53783 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms