Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Gm18592-201ENSMUST00000221529 276 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 AC159205.4-201ENSMUST00000225964 704 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 Gm5612-201ENSMUST00000053326 375 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Nkx2-1P50220 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Nkx2-1P50220 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.44□□□□□ -1.7
Nkx2-1P50220 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm44801-201ENSMUST00000207644 2060 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm23739-201ENSMUST00000102295 108 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm11905-201ENSMUST00000117653 678 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm11774-201ENSMUST00000118601 293 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm15981-201ENSMUST00000119196 457 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm16423-201ENSMUST00000120078 947 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm6175-201ENSMUST00000121351 400 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm14840-201ENSMUST00000122135 594 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm23964-201ENSMUST00000157966 107 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm26352-201ENSMUST00000158223 125 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm10177-201ENSMUST00000160052 444 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm17137-202ENSMUST00000165729 957 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm22993-201ENSMUST00000175423 254 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Mir6361-201ENSMUST00000185079 101 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm29492-201ENSMUST00000187124 457 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm28439-201ENSMUST00000187714 876 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Igkv12-67-201ENSMUST00000197806 354 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm44580-201ENSMUST00000206333 877 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC112680.2-201ENSMUST00000213119 595 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC122901.2-201ENSMUST00000216926 285 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm4012-201ENSMUST00000221504 581 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC165260.4-201ENSMUST00000225924 724 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 AC131029.2-201ENSMUST00000226696 628 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.43□□□□□ -1.7
Nkx2-1P50220 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Nkx2-1P50220 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.42□□□□□ -1.7
Nkx2-1P50220 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.42□□□□□ -1.7
Nkx2-1P50220 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.42□□□□□ -1.7
Nkx2-1P50220 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Nkx2-1P50220 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC4.42□□□□□ -1.7
Nkx2-1P50220 Gm11852-201ENSMUST00000120806 222 ntBASIC4.42□□□□□ -1.7
Nkx2-1P50220 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.42□□□□□ -1.7
Nkx2-1P50220 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms