Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Ighv1-45-201ENSMUST00000193677 352 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm6776-201ENSMUST00000057752 900 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Rfx1P48377 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Rfx1P48377 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.36□□□□□ -1.23
Rfx1P48377 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Rfx1P48377 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Rfx1P48377 AC162936.1-201ENSMUST00000223676 2368 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 AC124516.3-201ENSMUST00000221302 3613 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm7133-201ENSMUST00000187797 2039 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Rfx1P48377 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm24790-201ENSMUST00000104285 132 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm13751-201ENSMUST00000120280 752 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Defa-ps14-201ENSMUST00000121373 418 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm13642-201ENSMUST00000121697 381 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC7.35□□□□□ -1.23
Rfx1P48377 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm25944-201ENSMUST00000178758 94 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm27342-201ENSMUST00000183530 109 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm29385-201ENSMUST00000186831 363 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm28412-201ENSMUST00000187243 177 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm9504-201ENSMUST00000196322 468 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Ighv1-68-201ENSMUST00000198789 294 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Ighv1-79-201ENSMUST00000200152 350 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm2754-201ENSMUST00000223383 589 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Rfx1P48377 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Rfx1P48377 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Rfx1P48377 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Rfx1P48377 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Rfx1P48377 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.35□□□□□ -1.23
Rfx1P48377 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rfx1P48377 AC131720.1-201ENSMUST00000218629 2132 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm19552-201ENSMUST00000194744 2833 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm44735-201ENSMUST00000206197 1752 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.34□□□□□ -1.23
Rfx1P48377 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Rfx1P48377 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rfx1P48377 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm15531-201ENSMUST00000118062 252 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm13131-201ENSMUST00000122228 321 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm12778-201ENSMUST00000122341 333 ntBASIC7.34□□□□□ -1.23
Rfx1P48377 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.34□□□□□ -1.23
Rfx1P48377 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms