Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.21□□□□□ -1.58
HttP42859 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HttP42859 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.21□□□□□ -1.58
HttP42859 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HttP42859 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HttP42859 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HttP42859 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
HttP42859 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Mir551b-201ENSMUST00000102165 98 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm24505-201ENSMUST00000157682 126 ntBASIC5.2□□□□□ -1.58
HttP42859 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Gm18802-201ENSMUST00000186270 888 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm46998-201ENSMUST00000221444 330 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.2□□□□□ -1.58
HttP42859 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.2□□□□□ -1.58
HttP42859 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm10042-201ENSMUST00000079884 78 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.2□□□□□ -1.58
HttP42859 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.2□□□□□ -1.58
HttP42859 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Gm24939-201ENSMUST00000158325 137 ntBASIC5.2□□□□□ -1.58
HttP42859 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm19134-201ENSMUST00000221203 487 ntBASIC5.2□□□□□ -1.58
HttP42859 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.2□□□□□ -1.58
HttP42859 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.2□□□□□ -1.58
HttP42859 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HttP42859 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HttP42859 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Gm25923-201ENSMUST00000158312 138 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.19□□□□□ -1.58
HttP42859 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.19□□□□□ -1.58
HttP42859 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.19□□□□□ -1.58
HttP42859 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.19□□□□□ -1.58
HttP42859 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC5.19□□□□□ -1.58
HttP42859 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.19□□□□□ -1.58
HttP42859 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
HttP42859 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Gm24553-201ENSMUST00000158653 131 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm4845-201ENSMUST00000179202 562 ntBASIC5.19□□□□□ -1.58
HttP42859 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.19□□□□□ -1.58
HttP42859 Gm42999-201ENSMUST00000198049 786 ntBASIC5.19□□□□□ -1.58
HttP42859 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.19□□□□□ -1.58
HttP42859 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.19□□□□□ -1.58
HttP42859 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.19□□□□□ -1.58
HttP42859 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HttP42859 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.19□□□□□ -1.58
HttP42859 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HttP42859 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.19□□□□□ -1.58
HttP42859 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Gm22497-201ENSMUST00000104499 131 ntBASIC5.19□□□□□ -1.58
HttP42859 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HttP42859 Gm23789-201ENSMUST00000122536 301 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm22343-201ENSMUST00000122648 286 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm29228-201ENSMUST00000185489 418 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm44402-201ENSMUST00000203677 238 ntBASIC5.19□□□□□ -1.58
HttP42859 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.19□□□□□ -1.58
HttP42859 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.19□□□□□ -1.58
HttP42859 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.19□□□□□ -1.58
HttP42859 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
HttP42859 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HttP42859 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.18□□□□□ -1.58
HttP42859 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HttP42859 Gm11486-201ENSMUST00000107322 478 ntBASIC5.18□□□□□ -1.58
HttP42859 Gm11406-201ENSMUST00000117418 484 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms