Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm14510-201ENSMUST00000116165 1092 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm12467-201ENSMUST00000117625 745 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm6427-201ENSMUST00000118721 979 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm6584-201ENSMUST00000119671 447 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm25322-201ENSMUST00000122556 104 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm24961-201ENSMUST00000157918 184 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm3030-201ENSMUST00000163410 516 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm20613-201ENSMUST00000175828 345 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm20691-201ENSMUST00000176889 333 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm18558-201ENSMUST00000186253 1214 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm37629-201ENSMUST00000193635 1050 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm38060-201ENSMUST00000194822 464 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 AC154283.1-201ENSMUST00000228417 389 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm44739-201ENSMUST00000205294 1426 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm5925-201ENSMUST00000105016 1497 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm37048-201ENSMUST00000194827 5578 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm22426-201ENSMUST00000103811 96 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm4596-201ENSMUST00000117197 442 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm14745-201ENSMUST00000118480 1096 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm15361-201ENSMUST00000119320 444 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm12543-201ENSMUST00000120410 543 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm11759-201ENSMUST00000121742 464 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm14564-201ENSMUST00000122159 294 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm18595-201ENSMUST00000175736 1068 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm27018-201ENSMUST00000181136 225 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm37884-201ENSMUST00000191857 818 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm18791-201ENSMUST00000204611 726 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm5654-201ENSMUST00000217787 475 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 AC158955.1-201ENSMUST00000227140 385 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Gm9597-202ENSMUST00000227632 1387 ntBASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmcn1D3YXG0 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms