Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm27427-201ENSMUST00000185134 193 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm29640-201ENSMUST00000187972 278 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm37430-201ENSMUST00000193039 196 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm43136-201ENSMUST00000200403 636 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm44312-201ENSMUST00000203536 469 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm8523-201ENSMUST00000211386 552 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm4012-201ENSMUST00000221504 581 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm25515-201ENSMUST00000083858 157 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm45562-201ENSMUST00000210015 1537 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Mir700-201ENSMUST00000102169 79 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm15193-201ENSMUST00000120224 865 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm14939-201ENSMUST00000120347 680 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm14679-201ENSMUST00000121536 722 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm26069-201ENSMUST00000157497 277 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm23903-201ENSMUST00000157566 131 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm16102-201ENSMUST00000160955 420 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm9587-201ENSMUST00000172449 454 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm8183-201ENSMUST00000183134 980 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm9320-201ENSMUST00000184151 473 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ddx56Q9D0R4 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ddx56Q9D0R4 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Ddx56Q9D0R4 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.15□□□□□ -1.43
Ddx56Q9D0R4 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.15□□□□□ -1.43
Ddx56Q9D0R4 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Ddx56Q9D0R4 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms