Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm43456-201ENSMUST00000202519 457 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm45185-201ENSMUST00000207556 404 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm23623-201ENSMUST00000082461 107 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm7680-201ENSMUST00000216198 1348 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.92□□□□□ -1.62
Use1Q9CQ56 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Use1Q9CQ56 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm22266-201ENSMUST00000104011 138 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm25422-201ENSMUST00000104219 129 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm12931-201ENSMUST00000117046 324 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm10241-201ENSMUST00000117664 286 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm15233-201ENSMUST00000118747 400 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm15981-201ENSMUST00000119196 457 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm14603-201ENSMUST00000121275 448 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm24687-201ENSMUST00000157758 241 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm25489-201ENSMUST00000158727 141 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm16102-201ENSMUST00000160955 420 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm2325-201ENSMUST00000186637 581 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm6074-201ENSMUST00000193340 451 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Mir219c-201ENSMUST00000199860 60 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm35648-201ENSMUST00000202304 475 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.91□□□□□ -1.62
Use1Q9CQ56 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.91□□□□□ -1.62
Use1Q9CQ56 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.9□□□□□ -1.62
Use1Q9CQ56 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.9□□□□□ -1.62
Use1Q9CQ56 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.9□□□□□ -1.62
Use1Q9CQ56 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.9□□□□□ -1.62
Use1Q9CQ56 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Use1Q9CQ56 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.9□□□□□ -1.63
Use1Q9CQ56 Gm13681-201ENSMUST00000117925 210 ntBASIC4.9□□□□□ -1.63
Use1Q9CQ56 Gm13503-201ENSMUST00000119017 446 ntBASIC4.9□□□□□ -1.63
Use1Q9CQ56 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.9□□□□□ -1.63
Use1Q9CQ56 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.9□□□□□ -1.63
Use1Q9CQ56 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms