Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm10652-201ENSMUST00000199790 2622 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm15796-201ENSMUST00000162135 204 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm6155-201ENSMUST00000173735 341 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Mir6416-201ENSMUST00000183664 117 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm23925-202ENSMUST00000188429 132 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm43441-201ENSMUST00000201458 205 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a6Q8C6K9 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm12520-201ENSMUST00000117493 316 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm15390-201ENSMUST00000120323 738 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm4842-201ENSMUST00000183237 835 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm32308-201ENSMUST00000203053 280 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm45236-201ENSMUST00000208632 229 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm9685-201ENSMUST00000211275 538 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm31931-201ENSMUST00000219666 222 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm7040-201ENSMUST00000223271 443 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm43502-201ENSMUST00000200263 2596 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm11270-201ENSMUST00000117685 471 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm24444-201ENSMUST00000157244 308 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm8458-201ENSMUST00000196658 819 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm5027-201ENSMUST00000206700 375 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm33626-201ENSMUST00000206790 828 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.6□□□□□ -1.67
Col6a6Q8C6K9 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 AC107742.1-201ENSMUST00000227769 1390 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm25096-201ENSMUST00000104043 129 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm13367-201ENSMUST00000119955 796 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm16259-201ENSMUST00000145241 553 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm45156-201ENSMUST00000207255 439 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 AC158511.1-201ENSMUST00000223622 764 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Desi2-202ENSMUST00000069568 1193 ntBASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Col6a6Q8C6K9 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms