Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm5750-201ENSMUST00000218711 801 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm2645-201ENSMUST00000223516 547 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Clec2j-201ENSMUST00000032517 515 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm4853-201ENSMUST00000119359 394 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm11484-201ENSMUST00000119808 338 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm24860-201ENSMUST00000158457 276 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm23115-201ENSMUST00000158480 108 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm22261-201ENSMUST00000158691 324 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm9294-201ENSMUST00000165198 789 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm34176-201ENSMUST00000192621 474 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm42437-201ENSMUST00000197263 923 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm42428-201ENSMUST00000198677 302 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm17999-201ENSMUST00000211568 542 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm18904-201ENSMUST00000218756 329 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Upf3bQ3ULL6 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm8430-201ENSMUST00000119780 471 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm11804-201ENSMUST00000121663 468 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm14695-201ENSMUST00000121721 282 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm25846-201ENSMUST00000158013 135 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm25865-201ENSMUST00000158247 104 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm27820-201ENSMUST00000183628 175 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm27688-201ENSMUST00000183634 91 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Mir7235-201ENSMUST00000183796 56 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm38217-201ENSMUST00000194358 910 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm25260-201ENSMUST00000083053 134 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Gm26063-201ENSMUST00000083378 107 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Upf3bQ3ULL6 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms