Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm7039-201ENSMUST00000205138 346 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Gm6070-201ENSMUST00000207275 419 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC6.05□□□□□ -1.44
Msx2Q03358 Gm36247-201ENSMUST00000211834 285 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 AC116460.1-201ENSMUST00000219040 313 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Gm24254-201ENSMUST00000083702 104 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Msx2Q03358 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.05□□□□□ -1.44
Msx2Q03358 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.05□□□□□ -1.44
Msx2Q03358 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Msx2Q03358 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Msx2Q03358 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Msx2Q03358 Mir669i-201ENSMUST00000117007 127 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm14382-201ENSMUST00000117374 437 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm6427-201ENSMUST00000118721 979 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm15060-201ENSMUST00000119550 948 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm13711-201ENSMUST00000119708 453 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm7916-201ENSMUST00000120325 456 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm12332-201ENSMUST00000121397 922 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm25395-201ENSMUST00000157343 272 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm25898-201ENSMUST00000158303 106 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm24359-201ENSMUST00000158418 221 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm6395-201ENSMUST00000167639 691 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm24561-201ENSMUST00000175182 95 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm21638-201ENSMUST00000179473 836 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm27360-201ENSMUST00000183487 80 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm37837-201ENSMUST00000191743 604 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm20690-202ENSMUST00000195126 355 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm18340-201ENSMUST00000196342 609 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm5711-201ENSMUST00000197896 421 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm42594-201ENSMUST00000199511 246 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.04□□□□□ -1.44
Msx2Q03358 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm45226-201ENSMUST00000206602 288 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm19116-201ENSMUST00000218592 642 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.04□□□□□ -1.44
Msx2Q03358 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.04□□□□□ -1.44
Msx2Q03358 AC140451.2-202ENSMUST00000226156 574 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Msx2Q03358 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Msx2Q03358 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Msx2Q03358 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Msx2Q03358 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.04□□□□□ -1.44
Msx2Q03358 Gm23097-201ENSMUST00000083448 105 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms