Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Sox3P53784 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.1□□□□□ -1.59
Sox3P53784 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 Gm16571-201ENSMUST00000159112 291 ntBASIC5.1□□□□□ -1.59
Sox3P53784 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
Sox3P53784 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 Gm27541-201ENSMUST00000184078 122 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm27875-201ENSMUST00000184425 123 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm20561-201ENSMUST00000188131 292 ntBASIC5.1□□□□□ -1.59
Sox3P53784 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 Gm37503-201ENSMUST00000192088 319 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.1□□□□□ -1.59
Sox3P53784 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox3P53784 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox3P53784 Gm42643-201ENSMUST00000200504 279 ntBASIC5.1□□□□□ -1.59
Sox3P53784 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Sox3P53784 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Sox3P53784 Gm4714-201ENSMUST00000203395 279 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Gm20786-201ENSMUST00000212649 436 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sox3P53784 Gm19073-201ENSMUST00000219978 555 ntBASIC5.1□□□□□ -1.59
Sox3P53784 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.1□□□□□ -1.59
Sox3P53784 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.1□□□□□ -1.59
Sox3P53784 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Sox3P53784 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.1□□□□□ -1.59
Sox3P53784 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Sox3P53784 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Sox3P53784 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Gm12641-201ENSMUST00000117874 985 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm11826-201ENSMUST00000118781 438 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm12110-201ENSMUST00000121601 579 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.09□□□□□ -1.59
Sox3P53784 Gm16345-201ENSMUST00000146065 158 ntBASIC5.09□□□□□ -1.59
Sox3P53784 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 V1rg10-201ENSMUST00000183378 937 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Mir6400-201ENSMUST00000184870 92 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm28683-201ENSMUST00000187134 615 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm28840-205ENSMUST00000189320 615 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm28835-203ENSMUST00000190062 615 ntBASIC5.09□□□□□ -1.59
Sox3P53784 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm42983-201ENSMUST00000199879 815 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm29781-201ENSMUST00000203862 478 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Gm5735-201ENSMUST00000207053 167 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.09□□□□□ -1.59
Sox3P53784 Gm4963-201ENSMUST00000072718 378 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Sox3P53784 Gm23795-201ENSMUST00000084006 137 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Sox3P53784 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.09□□□□□ -1.59
Sox3P53784 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Sox3P53784 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
Sox3P53784 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Sox3P53784 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Sox3P53784 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.09□□□□□ -1.6
Sox3P53784 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.09□□□□□ -1.6
Sox3P53784 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.09□□□□□ -1.6
Sox3P53784 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Sox3P53784 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Sox3P53784 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Sox3P53784 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Sox3P53784 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Sox3P53784 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm12328-201ENSMUST00000118611 197 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm11975-201ENSMUST00000118772 481 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.08□□□□□ -1.6
Sox3P53784 Gm14831-201ENSMUST00000120253 409 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms