Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Usp4P35123 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.23□□□□□ -1.41
Usp4P35123 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp4P35123 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp4P35123 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Gm22370-201ENSMUST00000102422 83 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm26289-201ENSMUST00000104169 131 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm14294-201ENSMUST00000119749 751 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp4P35123 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm23034-201ENSMUST00000158001 147 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm22530-201ENSMUST00000158820 118 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm3221-201ENSMUST00000164869 440 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm17366-201ENSMUST00000167629 187 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm26194-201ENSMUST00000175036 71 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp4P35123 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp4P35123 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm8669-201ENSMUST00000183839 945 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm28527-201ENSMUST00000185210 297 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.22□□□□□ -1.41
Usp4P35123 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm37265-201ENSMUST00000191698 885 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm19104-201ENSMUST00000198392 679 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm2040-201ENSMUST00000202979 289 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm43979-201ENSMUST00000203179 475 ntBASIC6.22□□□□□ -1.41
Usp4P35123 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC6.22□□□□□ -1.41
Usp4P35123 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Usp4P35123 AV026068-216ENSMUST00000223874 328 ntBASIC6.22□□□□□ -1.41
Usp4P35123 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.22□□□□□ -1.41
Usp4P35123 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.22□□□□□ -1.41
Usp4P35123 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.22□□□□□ -1.41
Usp4P35123 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp4P35123 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.22□□□□□ -1.41
Usp4P35123 AC132336.1-201ENSMUST00000222844 1740 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp4P35123 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.22□□□□□ -1.41
Usp4P35123 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp4P35123 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Usp4P35123 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Usp4P35123 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.21□□□□□ -1.41
Usp4P35123 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Usp4P35123 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
Usp4P35123 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Usp4P35123 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Usp4P35123 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Usp4P35123 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp4P35123 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp4P35123 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp4P35123 Gm25795-201ENSMUST00000104421 132 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm13493-201ENSMUST00000120318 493 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm12881-201ENSMUST00000121191 203 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm16269-201ENSMUST00000160532 409 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Usp4P35123 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Usp4P35123 Gm25246-201ENSMUST00000175476 69 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm6472-201ENSMUST00000178147 651 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm27659-201ENSMUST00000183472 98 ntBASIC6.21□□□□□ -1.42
Usp4P35123 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp4P35123 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp4P35123 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp4P35123 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp4P35123 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp4P35123 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm18427-201ENSMUST00000195422 515 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usp4P35123 Gm38395-201ENSMUST00000199904 830 ntBASIC6.21□□□□□ -1.42
Usp4P35123 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms