Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Col1a1P11087 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 Gm42843-201ENSMUST00000196328 3616 ntBASIC6.04□□□□□ -1.44
Col1a1P11087 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Col1a1P11087 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm12285-201ENSMUST00000117347 233 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm13745-201ENSMUST00000121994 527 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm23673-201ENSMUST00000157474 298 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm24363-201ENSMUST00000158440 311 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm19898-201ENSMUST00000177490 251 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Mir6391-201ENSMUST00000184391 104 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm21856-201ENSMUST00000187547 696 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 AC161269.1-201ENSMUST00000228426 318 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Gm6863-201ENSMUST00000052882 636 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col1a1P11087 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Col1a1P11087 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col1a1P11087 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col1a1P11087 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.03□□□□□ -1.44
Col1a1P11087 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC6.03□□□□□ -1.44
Col1a1P11087 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col1a1P11087 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Col1a1P11087 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.03□□□□□ -1.44
Col1a1P11087 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Col1a1P11087 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Col1a1P11087 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col1a1P11087 Gm15772-201ENSMUST00000118533 438 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm6542-201ENSMUST00000153606 772 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm20701-201ENSMUST00000176082 347 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm5777-201ENSMUST00000177265 448 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm28097-201ENSMUST00000187333 366 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC6.02□□□□□ -1.44
Col1a1P11087 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC6.02□□□□□ -1.44
Col1a1P11087 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm37836-201ENSMUST00000195875 175 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Gm45651-201ENSMUST00000210857 335 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.02□□□□□ -1.44
Col1a1P11087 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Col1a1P11087 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
Col1a1P11087 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col1a1P11087 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col1a1P11087 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col1a1P11087 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col1a1P11087 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col1a1P11087 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Snord66-201ENSMUST00000104051 75 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Gm14563-201ENSMUST00000120571 354 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Gm11584-201ENSMUST00000120636 325 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Gm14212-201ENSMUST00000122023 826 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Gm27834-201ENSMUST00000183427 125 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Col1a1P11087 Gm43350-201ENSMUST00000196382 711 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Gm44237-201ENSMUST00000205183 936 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.02□□□□□ -1.45
Col1a1P11087 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col1a1P11087 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col1a1P11087 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 Gm43437-201ENSMUST00000198535 3955 ntBASIC6.01□□□□□ -1.45
Col1a1P11087 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col1a1P11087 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.01□□□□□ -1.45
Col1a1P11087 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms