Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm17170-201ENSMUST00000112785 316 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm15382-201ENSMUST00000118011 537 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm14082-201ENSMUST00000118582 801 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm24011-201ENSMUST00000157732 268 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm28885-201ENSMUST00000185615 563 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm36984-201ENSMUST00000192770 235 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm7285-201ENSMUST00000198801 580 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm44258-201ENSMUST00000204925 301 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm45026-201ENSMUST00000205292 833 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm45590-201ENSMUST00000209715 262 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.67□□□□□ -1.5
Hoxd3P09027 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm46311-201ENSMUST00000217971 203 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm9309-201ENSMUST00000223537 546 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm16415-201ENSMUST00000080097 489 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Hoxd3P09027 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 AC129308.2-203ENSMUST00000224109 2385 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Hoxd3P09027 Gm44996-201ENSMUST00000208787 2980 ntBASIC5.67□□□□□ -1.5
Hoxd3P09027 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Hoxd3P09027 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm43769-201ENSMUST00000201871 4323 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm45201-201ENSMUST00000207187 2679 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm25088-201ENSMUST00000101803 79 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm25213-201ENSMUST00000102388 113 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm22426-201ENSMUST00000103811 96 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm12765-201ENSMUST00000117273 615 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm7429-201ENSMUST00000118664 348 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm5060-201ENSMUST00000120072 599 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm13282-201ENSMUST00000121577 545 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Hoxd3P09027 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm22791-201ENSMUST00000157232 145 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm22795-201ENSMUST00000157233 118 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm23077-201ENSMUST00000157854 116 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm27579-201ENSMUST00000158113 63 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm7244-201ENSMUST00000164658 455 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm23144-201ENSMUST00000180226 107 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm8004-201ENSMUST00000187782 617 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm6631-201ENSMUST00000193699 559 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.66□□□□□ -1.5
Hoxd3P09027 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm4734-201ENSMUST00000200117 777 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.66□□□□□ -1.5
Hoxd3P09027 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.66□□□□□ -1.5
Hoxd3P09027 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Hoxd3P09027 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms