Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Desi2-202ENSMUST00000069568 1193 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 n-R5s170-201ENSMUST00000083726 113 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm43771-201ENSMUST00000202931 1578 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm13506-201ENSMUST00000120391 1083 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm38046-201ENSMUST00000192733 550 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm37925-201ENSMUST00000195352 4255 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm6719-201ENSMUST00000202067 335 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Gm2645-201ENSMUST00000223516 547 ntBASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ccdc180J3QNE4 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 CT025710.1-201ENSMUST00000222949 2533 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm8993-201ENSMUST00000182182 983 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm18864-201ENSMUST00000194518 1051 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm44757-201ENSMUST00000206373 157 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm19921-201ENSMUST00000210505 703 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 AC134439.1-201ENSMUST00000220923 600 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm5045-201ENSMUST00000027054 810 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm25260-201ENSMUST00000083053 134 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 AC131687.1-201ENSMUST00000225931 5446 ntBASIC9.44□□□□□ -0.9
Ccdc180J3QNE4 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm38351-201ENSMUST00000195466 2518 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm24125-201ENSMUST00000104105 137 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm22020-201ENSMUST00000104358 136 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm23608-201ENSMUST00000104545 128 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm14352-201ENSMUST00000119250 449 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm22804-201ENSMUST00000158052 101 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm44603-201ENSMUST00000206820 367 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm4290-201ENSMUST00000206897 814 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm37127-201ENSMUST00000192924 3036 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 AC153494.1-201ENSMUST00000218664 3041 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 AC190403.1-201ENSMUST00000224515 1325 ntBASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Ccdc180J3QNE4 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm11822-201ENSMUST00000119177 415 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Mir1947-201ENSMUST00000158235 85 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Mir6410-201ENSMUST00000184204 104 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm18177-201ENSMUST00000188373 404 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm28769-201ENSMUST00000190176 615 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm44412-201ENSMUST00000203018 294 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm37766-201ENSMUST00000192244 2567 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm12190-201ENSMUST00000120001 187 ntBASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ccdc180J3QNE4 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms