Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Gm38201-201ENSMUST00000192143 387 ntBASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Gm42665-201ENSMUST00000202100 586 ntBASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 AC136376.1-201ENSMUST00000228496 950 ntBASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Olfr895-201ENSMUST00000093864 951 ntBASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a3E9PWQ3 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm14382-201ENSMUST00000117374 437 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm15014-201ENSMUST00000120742 258 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm14776-201ENSMUST00000121029 887 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm26170-201ENSMUST00000158419 148 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm28957-201ENSMUST00000190174 373 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm36964-201ENSMUST00000191876 198 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm12231-201ENSMUST00000119447 695 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm24251-201ENSMUST00000157324 114 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm13249-201ENSMUST00000177803 345 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm13144-201ENSMUST00000179385 345 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm45857-201ENSMUST00000212207 356 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 AC113269.1-201ENSMUST00000227185 674 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Desi2-202ENSMUST00000069568 1193 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm24939-201ENSMUST00000158325 137 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm27528-201ENSMUST00000183544 205 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm8790-201ENSMUST00000194108 322 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm44054-201ENSMUST00000203814 372 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm34779-201ENSMUST00000210036 263 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Col6a3E9PWQ3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm14981-201ENSMUST00000117325 943 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm14000-201ENSMUST00000118670 233 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm6546-201ENSMUST00000192096 766 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Col6a3E9PWQ3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms