Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm26146-201ENSMUST00000104478 185 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm8145-201ENSMUST00000118220 745 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm13503-201ENSMUST00000119017 446 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm11822-201ENSMUST00000119177 415 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm26950-201ENSMUST00000182734 498 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm18426-201ENSMUST00000191874 973 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn3aA2ASI5 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm9687-201ENSMUST00000189312 602 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm37961-201ENSMUST00000192729 299 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm43350-201ENSMUST00000196382 711 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm45610-201ENSMUST00000209227 784 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm20586-201ENSMUST00000210122 547 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm5750-201ENSMUST00000218711 801 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm26034-201ENSMUST00000158154 116 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 V1rg10-201ENSMUST00000183378 937 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm27688-201ENSMUST00000183634 91 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm45070-201ENSMUST00000208100 246 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn3aA2ASI5 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm26330-201ENSMUST00000082817 104 ntBASIC5.68□□□□□ -1.5
Scn3aA2ASI5 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm3362-201ENSMUST00000148102 466 ntBASIC5.67□□□□□ -1.5
Scn3aA2ASI5 Gm18791-201ENSMUST00000204611 726 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms