Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm26925-201ENSMUST00000182470 957 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm19231-201ENSMUST00000193212 830 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm43215-201ENSMUST00000199108 252 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm17984-201ENSMUST00000205286 859 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm45422-201ENSMUST00000211476 246 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm21041-201ENSMUST00000214829 823 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm23330-201ENSMUST00000082660 164 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm16394-201ENSMUST00000117289 675 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm5334-201ENSMUST00000187472 720 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm29813-201ENSMUST00000195856 447 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm44820-201ENSMUST00000207420 396 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm3912-203ENSMUST00000211024 367 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 AV026068-220ENSMUST00000224153 1147 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 AV026068-237ENSMUST00000226075 572 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
H2afb2S4R1M3 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm22468-201ENSMUST00000116680 120 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm26248-201ENSMUST00000116700 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm26137-201ENSMUST00000116701 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm26190-201ENSMUST00000116704 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm24617-201ENSMUST00000116705 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm25778-201ENSMUST00000116713 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm25774-201ENSMUST00000116717 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm22102-201ENSMUST00000116730 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm23177-201ENSMUST00000116784 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm24193-201ENSMUST00000116801 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm24744-201ENSMUST00000116833 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm24427-201ENSMUST00000116896 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm22346-201ENSMUST00000116918 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm23606-201ENSMUST00000116938 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm22029-201ENSMUST00000116940 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm26298-201ENSMUST00000116956 121 ntBASIC5.12□□□□□ -1.59
H2afb2S4R1M3 Gm23844-201ENSMUST00000116959 121 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms