Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm26300-201ENSMUST00000102282 94 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm25422-201ENSMUST00000104219 129 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm14512-201ENSMUST00000117924 230 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm14175-201ENSMUST00000119835 241 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm15803-201ENSMUST00000120118 394 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm12110-201ENSMUST00000121601 579 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm20519-201ENSMUST00000173684 359 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm8993-201ENSMUST00000182182 983 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm43444-201ENSMUST00000198123 291 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm44277-201ENSMUST00000205128 649 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm5418-201ENSMUST00000206932 528 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AV026068-231ENSMUST00000225862 482 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC161609.1-201ENSMUST00000225878 474 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm23211-201ENSMUST00000122717 308 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm24477-201ENSMUST00000157438 103 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm16125-201ENSMUST00000159003 339 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm15838-201ENSMUST00000161575 180 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm15812-201ENSMUST00000162331 748 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm8358-201ENSMUST00000167222 555 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm8941-201ENSMUST00000181451 899 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm5946-201ENSMUST00000182340 970 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Mir6412-201ENSMUST00000184477 97 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm37503-201ENSMUST00000192088 319 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm45700-201ENSMUST00000205866 347 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm3257-201ENSMUST00000207217 675 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm6362-201ENSMUST00000217686 836 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm8672-201ENSMUST00000221200 332 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm22456-201ENSMUST00000082578 125 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cdc40Q9DC48 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cdc40Q9DC48 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms