Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm23440-201ENSMUST00000104299 130 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm26474-201ENSMUST00000116762 122 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm13641-201ENSMUST00000117993 473 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm25826-201ENSMUST00000157090 137 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm24441-201ENSMUST00000157235 281 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm26410-201ENSMUST00000157670 261 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm23050-201ENSMUST00000158775 165 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm15970-201ENSMUST00000160623 834 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm3242-201ENSMUST00000171273 485 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm26057-201ENSMUST00000178099 165 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm8581-201ENSMUST00000188636 890 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm42776-201ENSMUST00000198031 406 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm9173-201ENSMUST00000198054 400 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm45082-201ENSMUST00000206082 601 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm45382-201ENSMUST00000210607 151 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm7802-201ENSMUST00000216464 262 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Gm42484-201ENSMUST00000196075 2104 ntBASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm16007-201ENSMUST00000117837 286 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm14783-201ENSMUST00000118900 663 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm13677-201ENSMUST00000120739 595 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm12618-201ENSMUST00000121754 483 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm12488-201ENSMUST00000122449 499 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm25117-201ENSMUST00000157194 144 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm26106-201ENSMUST00000157254 228 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm17137-202ENSMUST00000165729 957 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm13147-202ENSMUST00000177526 1173 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC6.16□□□□□ -1.42
Ddx56Q9D0R4 Gm27942-201ENSMUST00000184669 101 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms