Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm11200-201ENSMUST00000121698 448 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm16456-201ENSMUST00000174431 920 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm22852-201ENSMUST00000177899 101 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm27024-201ENSMUST00000182561 755 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm24949-201ENSMUST00000183609 215 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm27541-201ENSMUST00000184078 122 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm9134-201ENSMUST00000193186 551 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm6543-201ENSMUST00000197353 808 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm45215-201ENSMUST00000206407 395 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc28aQ8CEI3 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm22592-201ENSMUST00000104242 131 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm25714-201ENSMUST00000158626 296 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm18953-201ENSMUST00000175694 300 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Mir6539-201ENSMUST00000183732 110 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm44281-201ENSMUST00000203090 166 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.28□□□□□ -1.56
Ccdc28aQ8CEI3 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm14082-201ENSMUST00000118582 801 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm11409-201ENSMUST00000118621 403 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm15828-201ENSMUST00000119911 522 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm14369-201ENSMUST00000121355 285 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Gm26172-201ENSMUST00000158421 134 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.27□□□□□ -1.57
Ccdc28aQ8CEI3 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms