Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm6717-201ENSMUST00000185549 838 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm37177-201ENSMUST00000193768 417 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43689-201ENSMUST00000195951 427 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm19219-201ENSMUST00000215863 724 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm19168-201ENSMUST00000218804 1091 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm5185-201ENSMUST00000080271 619 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22684-201ENSMUST00000082849 132 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sh3rf1Q69ZI1 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm23942-201ENSMUST00000101956 107 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm22591-201ENSMUST00000104243 106 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12492-201ENSMUST00000117665 564 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13265-201ENSMUST00000118090 421 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14870-201ENSMUST00000118414 156 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11976-201ENSMUST00000119236 295 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm15060-201ENSMUST00000119550 948 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm7916-201ENSMUST00000120325 456 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12654-201ENSMUST00000120387 587 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3835-201ENSMUST00000120752 403 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm14349-201ENSMUST00000137155 902 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm11545-201ENSMUST00000146507 375 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm23435-201ENSMUST00000157183 156 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm3111-201ENSMUST00000167426 490 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm26993-201ENSMUST00000182766 789 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm18291-201ENSMUST00000190791 301 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm37353-201ENSMUST00000194497 313 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm2314-201ENSMUST00000200391 586 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm43850-201ENSMUST00000202021 578 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm8264-201ENSMUST00000217801 465 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.48□□□□□ -1.37
Sh3rf1Q69ZI1 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms