Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm13451-201ENSMUST00000117649 592 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm14985-201ENSMUST00000118693 786 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm23964-201ENSMUST00000157966 107 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm25861-201ENSMUST00000158251 109 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm4831-201ENSMUST00000174626 594 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm26925-201ENSMUST00000182470 957 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm28353-201ENSMUST00000186482 570 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm28533-201ENSMUST00000186741 570 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm5285-201ENSMUST00000193089 666 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm9173-201ENSMUST00000198054 400 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm4321-201ENSMUST00000200520 442 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm4587-201ENSMUST00000209135 637 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm6474-201ENSMUST00000223250 699 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Mir20a-201ENSMUST00000083508 107 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm9386-201ENSMUST00000095195 381 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf3bQ3ULL6 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm25595-201ENSMUST00000102273 97 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm26067-201ENSMUST00000103789 110 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm22273-201ENSMUST00000104040 132 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Mir290a-201ENSMUST00000104627 83 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm5699-201ENSMUST00000152491 723 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm27849-201ENSMUST00000183673 125 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Mir6400-201ENSMUST00000184870 92 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm37700-201ENSMUST00000192617 965 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm10048-201ENSMUST00000194196 372 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm44048-201ENSMUST00000204531 361 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm45422-201ENSMUST00000211476 246 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC132446.1-201ENSMUST00000222655 226 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf3bQ3ULL6 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm7657-201ENSMUST00000118851 666 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm15791-201ENSMUST00000120365 319 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm12007-201ENSMUST00000120978 597 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm13489-201ENSMUST00000121234 971 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm11197-201ENSMUST00000145158 839 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm23993-201ENSMUST00000157478 144 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm10319-202ENSMUST00000159439 846 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm7316-201ENSMUST00000165395 445 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm6632-201ENSMUST00000168425 954 ntBASIC5.53□□□□□ -1.52
Upf3bQ3ULL6 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms