Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm8920-201ENSMUST00000196153 924 ntBASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Gm18011-201ENSMUST00000203717 565 ntBASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Gm4587-201ENSMUST00000209135 637 ntBASIC5.54□□□□□ -1.52
Trim43aQ3TL54 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Gm5750-201ENSMUST00000218711 801 ntBASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Gm272-201ENSMUST00000222073 919 ntBASIC5.54□□□□□ -1.52
Trim43aQ3TL54 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim43aQ3TL54 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm11481-201ENSMUST00000120069 255 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm13121-201ENSMUST00000120637 632 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm24065-201ENSMUST00000157487 264 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Mir7687-201ENSMUST00000184722 59 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim43aQ3TL54 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm13172-201ENSMUST00000118685 256 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm13367-201ENSMUST00000119955 796 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm13489-201ENSMUST00000121234 971 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Mir409-201ENSMUST00000198153 79 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm43054-201ENSMUST00000199495 884 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm6261-201ENSMUST00000204707 760 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Mir20a-201ENSMUST00000083508 107 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim43aQ3TL54 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim43aQ3TL54 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms