Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.26□□□□□ -1.41
Sox9Q04887 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox9Q04887 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.26□□□□□ -1.41
Sox9Q04887 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Sox9Q04887 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Sox9Q04887 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox9Q04887 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Sox9Q04887 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sox9Q04887 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 AC132336.1-201ENSMUST00000222844 1740 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.25□□□□□ -1.41
Sox9Q04887 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm8595-201ENSMUST00000118250 630 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm11617-201ENSMUST00000119609 639 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm4914-201ENSMUST00000119757 459 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm8080-201ENSMUST00000122046 1155 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm11834-201ENSMUST00000122257 585 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm26106-201ENSMUST00000157254 228 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm8358-201ENSMUST00000167222 555 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox9Q04887 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm20545-201ENSMUST00000174739 210 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm26933-201ENSMUST00000182320 827 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Mir6343-201ENSMUST00000183584 84 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm28859-201ENSMUST00000186650 616 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm21617-201ENSMUST00000188297 691 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm29160-201ENSMUST00000190094 699 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm37758-201ENSMUST00000194275 629 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm37477-201ENSMUST00000195215 884 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm43516-201ENSMUST00000196891 322 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm20940-201ENSMUST00000197308 360 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.25□□□□□ -1.41
Sox9Q04887 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm2961-201ENSMUST00000211074 772 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm7119-201ENSMUST00000221345 695 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm7557-201ENSMUST00000221935 865 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm26072-201ENSMUST00000083135 107 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox9Q04887 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Sox9Q04887 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Sox9Q04887 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Sox9Q04887 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.25□□□□□ -1.41
Sox9Q04887 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Sox9Q04887 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox9Q04887 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Sox9Q04887 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.24□□□□□ -1.41
Sox9Q04887 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox9Q04887 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox9Q04887 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Sox9Q04887 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms