Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm45422-201ENSMUST00000211476 246 ntBASIC5.74□□□□□ -1.49
NcanP55066 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.74□□□□□ -1.49
NcanP55066 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.74□□□□□ -1.49
NcanP55066 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NcanP55066 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NcanP55066 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NcanP55066 Synpr-207ENSMUST00000223583 3362 ntBASIC5.74□□□□□ -1.49
NcanP55066 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.74□□□□□ -1.49
NcanP55066 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NcanP55066 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.74□□□□□ -1.49
NcanP55066 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.74□□□□□ -1.49
NcanP55066 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NcanP55066 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NcanP55066 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
NcanP55066 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.73□□□□□ -1.49
NcanP55066 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.73□□□□□ -1.49
NcanP55066 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm24792-201ENSMUST00000104286 128 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm26146-201ENSMUST00000104478 185 ntBASIC5.73□□□□□ -1.49
NcanP55066 Mir290a-201ENSMUST00000104627 83 ntBASIC5.73□□□□□ -1.49
NcanP55066 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
NcanP55066 Gm9836-201ENSMUST00000117132 216 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm12520-201ENSMUST00000117493 316 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm14688-201ENSMUST00000119169 303 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm15263-201ENSMUST00000121556 642 ntBASIC5.73□□□□□ -1.49
NcanP55066 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.73□□□□□ -1.49
NcanP55066 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm29045-201ENSMUST00000187278 698 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.73□□□□□ -1.49
NcanP55066 Gm2367-201ENSMUST00000192374 472 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm37167-201ENSMUST00000194946 396 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm43444-201ENSMUST00000198123 291 ntBASIC5.73□□□□□ -1.49
NcanP55066 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NcanP55066 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
NcanP55066 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.73□□□□□ -1.49
NcanP55066 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.73□□□□□ -1.49
NcanP55066 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NcanP55066 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NcanP55066 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.72□□□□□ -1.49
NcanP55066 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.72□□□□□ -1.49
NcanP55066 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NcanP55066 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NcanP55066 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NcanP55066 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NcanP55066 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.72□□□□□ -1.49
NcanP55066 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NcanP55066 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.72□□□□□ -1.49
NcanP55066 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
NcanP55066 Gm25168-201ENSMUST00000104189 132 ntBASIC5.72□□□□□ -1.49
NcanP55066 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NcanP55066 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NcanP55066 Gm15357-201ENSMUST00000119160 285 ntBASIC5.72□□□□□ -1.49
NcanP55066 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.72□□□□□ -1.49
NcanP55066 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.72□□□□□ -1.49
NcanP55066 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.72□□□□□ -1.49
NcanP55066 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NcanP55066 Gm23207-201ENSMUST00000158665 102 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NcanP55066 Gm16107-201ENSMUST00000162523 862 ntBASIC5.72□□□□□ -1.49
NcanP55066 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm27564-201ENSMUST00000185196 96 ntBASIC5.72□□□□□ -1.49
NcanP55066 Ighv6-2-201ENSMUST00000192430 295 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm37102-201ENSMUST00000195740 1105 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm7721-201ENSMUST00000200446 546 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm8719-201ENSMUST00000203602 534 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NcanP55066 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.72□□□□□ -1.49
NcanP55066 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.72□□□□□ -1.49
NcanP55066 Gm18363-201ENSMUST00000221671 730 ntBASIC5.72□□□□□ -1.49
NcanP55066 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.72□□□□□ -1.49
NcanP55066 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms