Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm23608-201ENSMUST00000104545 128 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Gm12466-201ENSMUST00000121199 620 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Gm23023-201ENSMUST00000158767 109 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Gm45236-201ENSMUST00000208632 229 ntBASIC7.9□□□□□ -1.14
Cux1P53564 AC142273.1-201ENSMUST00000213723 673 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Snora52-201ENSMUST00000082732 137 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Gm22350-201ENSMUST00000083924 156 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Cux1P53564 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.9□□□□□ -1.14
Cux1P53564 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.9□□□□□ -1.14
Cux1P53564 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Cux1P53564 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Cux1P53564 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Cux1P53564 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Cux1P53564 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Cux1P53564 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Cux1P53564 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.9□□□□□ -1.15
Cux1P53564 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cux1P53564 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Cux1P53564 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Cux1P53564 Gm11196-201ENSMUST00000119052 395 ntBASIC7.89□□□□□ -1.15
Cux1P53564 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.89□□□□□ -1.15
Cux1P53564 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC7.89□□□□□ -1.15
Cux1P53564 Gm15740-201ENSMUST00000159703 1292 ntBASIC7.89□□□□□ -1.15
Cux1P53564 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC7.89□□□□□ -1.15
Cux1P53564 Gm44237-201ENSMUST00000205183 936 ntBASIC7.89□□□□□ -1.15
Cux1P53564 Gm19096-201ENSMUST00000209705 766 ntBASIC7.89□□□□□ -1.15
Cux1P53564 AC139758.1-201ENSMUST00000226573 930 ntBASIC7.89□□□□□ -1.15
Cux1P53564 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Cux1P53564 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cux1P53564 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC7.89□□□□□ -1.15
Cux1P53564 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cux1P53564 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Cux1P53564 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Cux1P53564 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.89□□□□□ -1.15
Cux1P53564 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Cux1P53564 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cux1P53564 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Cux1P53564 Gm43771-201ENSMUST00000202931 1578 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC7.88□□□□□ -1.15
Cux1P53564 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm12237-201ENSMUST00000120158 470 ntBASIC7.88□□□□□ -1.15
Cux1P53564 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Gm27387-201ENSMUST00000184583 116 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm37581-201ENSMUST00000192371 988 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm38046-201ENSMUST00000192733 550 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm10292-202ENSMUST00000193165 585 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm7822-201ENSMUST00000222433 581 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Cux1P53564 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Cux1P53564 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Cux1P53564 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm16250-201ENSMUST00000148974 256 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm25278-201ENSMUST00000157267 120 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm24113-201ENSMUST00000157477 276 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Zakit-201ENSMUST00000157677 308 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Gm19206-201ENSMUST00000186401 827 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm37719-201ENSMUST00000194615 292 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC7.88□□□□□ -1.15
Cux1P53564 Gm44307-201ENSMUST00000204466 764 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm19921-201ENSMUST00000210505 703 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gm8137-201ENSMUST00000218997 463 ntBASIC7.88□□□□□ -1.15
Cux1P53564 CT030242.3-201ENSMUST00000221231 581 ntBASIC7.88□□□□□ -1.15
Cux1P53564 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 AC141425.1-201ENSMUST00000224989 265 ntBASIC7.88□□□□□ -1.15
Cux1P53564 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Cux1P53564 Smc5-206ENSMUST00000226111 3265 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Cux1P53564 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Gm38137-201ENSMUST00000193735 1401 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Cux1P53564 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.87□□□□□ -1.15
Cux1P53564 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.87□□□□□ -1.15
Cux1P53564 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Cux1P53564 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.87□□□□□ -1.15
Cux1P53564 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms