Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm27193-201ENSMUST00000184217 586 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm28113-201ENSMUST00000188280 229 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm7299-201ENSMUST00000194441 581 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Mir219c-201ENSMUST00000199860 60 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm5735-201ENSMUST00000207053 167 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC6.08□□□□□ -1.44
Shmt1P50431 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.08□□□□□ -1.44
Shmt1P50431 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Shmt1P50431 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm17165-201ENSMUST00000096155 493 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm10540-201ENSMUST00000097581 276 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm37598-201ENSMUST00000194506 1301 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Shmt1P50431 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm26078-201ENSMUST00000104067 128 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm14931-201ENSMUST00000111079 253 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm15159-201ENSMUST00000117062 764 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm11905-201ENSMUST00000117653 678 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm6427-201ENSMUST00000118721 979 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm14521-201ENSMUST00000119545 350 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm12825-201ENSMUST00000120249 563 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm15044-201ENSMUST00000120703 598 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm12322-201ENSMUST00000121605 389 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm4725-201ENSMUST00000151048 587 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm23250-201ENSMUST00000157444 267 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm22186-201ENSMUST00000157822 122 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm23385-201ENSMUST00000158592 295 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm21756-201ENSMUST00000178380 930 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm21405-201ENSMUST00000179024 930 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm8993-201ENSMUST00000182182 983 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm26914-201ENSMUST00000182262 223 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm21191-201ENSMUST00000186484 930 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm29503-201ENSMUST00000191044 930 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm19739-201ENSMUST00000195941 153 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm43476-201ENSMUST00000197873 405 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm10709-201ENSMUST00000213318 480 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Shmt1P50431 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Shmt1P50431 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Shmt1P50431 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Shmt1P50431 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Shmt1P50431 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.07□□□□□ -1.44
Shmt1P50431 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Shmt1P50431 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Shmt1P50431 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms