Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm23631-201ENSMUST00000175291 123 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Mir5110-201ENSMUST00000175537 87 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm37774-201ENSMUST00000194401 245 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gm43345-201ENSMUST00000199484 269 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Usp4P35123 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.24□□□□□ -1.41
Usp4P35123 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm18467-201ENSMUST00000208805 434 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.24□□□□□ -1.41
Usp4P35123 AC156504.1-201ENSMUST00000214608 157 ntBASIC6.24□□□□□ -1.41
Usp4P35123 AC157017.2-201ENSMUST00000218354 777 ntBASIC6.24□□□□□ -1.41
Usp4P35123 AC166358.6-201ENSMUST00000221834 1206 ntBASIC6.24□□□□□ -1.41
Usp4P35123 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.24□□□□□ -1.41
Usp4P35123 AC154198.1-201ENSMUST00000222839 424 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.24□□□□□ -1.41
Usp4P35123 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.24□□□□□ -1.41
Usp4P35123 CT025603.4-201ENSMUST00000225777 413 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp4P35123 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm24150-201ENSMUST00000082759 104 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Gm22126-201ENSMUST00000083244 142 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Usp4P35123 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.24□□□□□ -1.41
Usp4P35123 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Usp4P35123 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Usp4P35123 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Usp4P35123 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp4P35123 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Usp4P35123 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp4P35123 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm12442-201ENSMUST00000118372 338 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm12099-201ENSMUST00000118660 750 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm15019-201ENSMUST00000120148 434 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm12706-201ENSMUST00000121588 698 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Mir1960-201ENSMUST00000157488 78 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm23894-201ENSMUST00000158107 313 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm25898-201ENSMUST00000158303 106 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm6541-201ENSMUST00000165542 561 ntBASIC6.23□□□□□ -1.41
Usp4P35123 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm17511-201ENSMUST00000172206 342 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm38122-201ENSMUST00000192679 885 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp4P35123 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp4P35123 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp4P35123 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm45473-201ENSMUST00000211452 616 ntBASIC6.23□□□□□ -1.41
Usp4P35123 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.23□□□□□ -1.41
Usp4P35123 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.23□□□□□ -1.41
Usp4P35123 AC121844.1-201ENSMUST00000218706 137 ntBASIC6.23□□□□□ -1.41
Usp4P35123 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.23□□□□□ -1.41
Usp4P35123 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.23□□□□□ -1.41
Usp4P35123 AC129208.2-201ENSMUST00000228506 320 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp4P35123 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp4P35123 Gm23407-201ENSMUST00000082538 91 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Gm22444-201ENSMUST00000093693 108 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp4P35123 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Usp4P35123 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.23□□□□□ -1.41
Usp4P35123 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp4P35123 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms