Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm37581-201ENSMUST00000192371 988 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm10048-201ENSMUST00000194196 372 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.35□□□□□ -1.55
Col4a6B1AVK5 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.35□□□□□ -1.55
Col4a6B1AVK5 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Snord66-201ENSMUST00000104051 75 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm13745-201ENSMUST00000121994 527 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm24113-201ENSMUST00000157477 276 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm3145-201ENSMUST00000188584 220 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 AC125487.2-201ENSMUST00000219810 1300 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col4a6B1AVK5 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm45236-201ENSMUST00000208632 229 ntBASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm25260-201ENSMUST00000083053 134 ntBASIC5.34□□□□□ -1.56
Col4a6B1AVK5 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col4a6B1AVK5 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm11486-201ENSMUST00000107322 478 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm11699-201ENSMUST00000119016 401 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm16250-201ENSMUST00000148974 256 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm22160-201ENSMUST00000158405 328 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm26362-201ENSMUST00000158865 315 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm17081-201ENSMUST00000167363 478 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Mir7047-201ENSMUST00000184595 64 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm44237-201ENSMUST00000205183 936 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm19096-201ENSMUST00000209705 766 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm8137-201ENSMUST00000218997 463 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.33□□□□□ -1.56
Col4a6B1AVK5 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms