Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm5538W4VSP6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gm13401-201ENSMUST00000117074 291 ntBASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gm15375-201ENSMUST00000119510 849 ntBASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gm10138-203ENSMUST00000206952 366 ntBASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.11■□□□□ 0.49
Gm5538W4VSP6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm5538W4VSP6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Gm27011-201ENSMUST00000182352 972 ntBASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.09■□□□□ 0.49
Gm5538W4VSP6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5538W4VSP6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm5538W4VSP6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Gm5538W4VSP6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm5538W4VSP6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm5538W4VSP6 Gm29791-202ENSMUST00000207888 369 ntBASIC18.08■□□□□ 0.48
Gm5538W4VSP6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5538W4VSP6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm5538W4VSP6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm5538W4VSP6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm5538W4VSP6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Gm42545-201ENSMUST00000202755 922 ntBASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm5538W4VSP6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm5538W4VSP6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms