Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2afb3S4R1G7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
H2afb3S4R1G7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
H2afb3S4R1G7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 AV356131-201ENSMUST00000206201 750 ntBASIC15.96■□□□□ 0.15
H2afb3S4R1G7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
H2afb3S4R1G7 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.96■□□□□ 0.14
H2afb3S4R1G7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb3S4R1G7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb3S4R1G7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
H2afb3S4R1G7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
H2afb3S4R1G7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Gm8969-201ENSMUST00000199694 526 ntBASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
H2afb3S4R1G7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
H2afb3S4R1G7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms