Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Crlf3Q9Z2L7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Crlf3Q9Z2L7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Crlf3Q9Z2L7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Crlf3Q9Z2L7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Crlf3Q9Z2L7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Crlf3Q9Z2L7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Crlf3Q9Z2L7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Crlf3Q9Z2L7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Crlf3Q9Z2L7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crlf3Q9Z2L7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crlf3Q9Z2L7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Crlf3Q9Z2L7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Crlf3Q9Z2L7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms