Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Phf1Q9Z1B8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Phf1Q9Z1B8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Phf1Q9Z1B8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Phf1Q9Z1B8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Phf1Q9Z1B8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Phf1Q9Z1B8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Phf1Q9Z1B8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Gm13158-201ENSMUST00000122007 736 ntBASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Phf1Q9Z1B8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Phf1Q9Z1B8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Gm6576-201ENSMUST00000169678 883 ntBASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Zfp783-201ENSMUST00000095946 670 ntBASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Phf1Q9Z1B8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Phf1Q9Z1B8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.29■□□□□ 0.2
Phf1Q9Z1B8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Mtag2-201ENSMUST00000058665 714 ntBASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phf1Q9Z1B8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms