Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Smarcb1Q9Z0H3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Gm10231-201ENSMUST00000181584 441 ntBASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Gm10175-202ENSMUST00000208752 441 ntBASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.4■□□□□ 0.54
Smarcb1Q9Z0H3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcb1Q9Z0H3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Gm24841-201ENSMUST00000158676 357 ntBASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcb1Q9Z0H3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcb1Q9Z0H3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smarcb1Q9Z0H3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms