Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn8aQ9WTU3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn8aQ9WTU3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn8aQ9WTU3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn8aQ9WTU3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn8aQ9WTU3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn8aQ9WTU3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn8aQ9WTU3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn8aQ9WTU3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scn8aQ9WTU3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn8aQ9WTU3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms