Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16■□□□□ 0.15
Sec61a2Q9JLR1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sec61a2Q9JLR1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sec61a2Q9JLR1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Gm4968-201ENSMUST00000071458 858 ntBASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sec61a2Q9JLR1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Gm26524-201ENSMUST00000192339 390 ntBASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sec61a2Q9JLR1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Sec61a2Q9JLR1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sec61a2Q9JLR1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sec61a2Q9JLR1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sec61a2Q9JLR1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sec61a2Q9JLR1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sec61a2Q9JLR1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms