Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Gm10418-201ENSMUST00000100943 576 ntBASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx5Q9JL61 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.78■□□□□ 0.6
Rfx5Q9JL61 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx5Q9JL61 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx5Q9JL61 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx5Q9JL61 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx5Q9JL61 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Rfx5Q9JL61 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Gm715-201ENSMUST00000117865 831 ntBASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx5Q9JL61 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx5Q9JL61 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx5Q9JL61 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Gm10517-202ENSMUST00000192970 758 ntBASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx5Q9JL61 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Rarb-207ENSMUST00000225921 2756 ntBASIC18.72■□□□□ 0.59
Rfx5Q9JL61 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rfx5Q9JL61 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms