Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Gm18671-201ENSMUST00000214826 683 ntBASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rbfox1Q9JJ43 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.11■□□□□ 0.01
Rbfox1Q9JJ43 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rbfox1Q9JJ43 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Gm10418-201ENSMUST00000100943 576 ntBASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rbfox1Q9JJ43 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.08■□□□□ 0.01
Rbfox1Q9JJ43 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rbfox1Q9JJ43 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rbfox1Q9JJ43 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Gm7290-201ENSMUST00000104990 617 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Gm12918-201ENSMUST00000120234 636 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Gm15710-201ENSMUST00000121821 636 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Gm5075-201ENSMUST00000196916 622 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.08■□□□□ 0
Rbfox1Q9JJ43 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Gm38285-201ENSMUST00000192928 922 ntBASIC15.07■□□□□ 0
Rbfox1Q9JJ43 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms