Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cacna1fQ9JIS7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Gm25016-201ENSMUST00000158399 131 ntBASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cacna1fQ9JIS7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Gm10566-201ENSMUST00000086739 996 ntBASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.24■□□□□ 0.83
Cacna1fQ9JIS7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Gm29518-201ENSMUST00000190858 372 ntBASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Idnk-204ENSMUST00000226010 1898 ntBASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Gm17807-201ENSMUST00000186869 298 ntBASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.23■□□□□ 0.83
Cacna1fQ9JIS7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Gm28033-201ENSMUST00000184224 96 ntBASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cacna1fQ9JIS7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Gm7213-201ENSMUST00000215977 950 ntBASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cacna1fQ9JIS7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Actl10-202ENSMUST00000226583 1501 ntBASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Gm27704-201ENSMUST00000185094 107 ntBASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Gm17808-201ENSMUST00000200859 894 ntBASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cacna1fQ9JIS7 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Gm27389-201ENSMUST00000183622 195 ntBASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cacna1fQ9JIS7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms