Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtp4Q9ER80 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rtp4Q9ER80 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.61■□□□□ 0.25
Rtp4Q9ER80 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtp4Q9ER80 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Gm11927-201ENSMUST00000118472 759 ntBASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Gm13158-201ENSMUST00000122007 736 ntBASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.59■□□□□ 0.25
Rtp4Q9ER80 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtp4Q9ER80 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp4Q9ER80 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp4Q9ER80 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp4Q9ER80 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp4Q9ER80 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp4Q9ER80 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtp4Q9ER80 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Gm6576-201ENSMUST00000169678 883 ntBASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.58■□□□□ 0.24
Rtp4Q9ER80 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.58■□□□□ 0.24
Rtp4Q9ER80 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rtp4Q9ER80 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Flg-201ENSMUST00000050758 1488 ntBASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rtp4Q9ER80 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Gm15378-201ENSMUST00000121894 207 ntBASIC16.56■□□□□ 0.24
Rtp4Q9ER80 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms