Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn3Q9DCB1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgn3Q9DCB1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgn3Q9DCB1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hmgn3Q9DCB1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hmgn3Q9DCB1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 Gm43137-201ENSMUST00000198052 594 ntBASIC16.63■□□□□ 0.25
Hmgn3Q9DCB1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms