Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bl1Q9D701 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Upk3bl1Q9D701 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Upk3bl1Q9D701 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Upk3bl1Q9D701 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Upk3bl1Q9D701 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Dancr-204ENSMUST00000132389 2347 ntBASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk3bl1Q9D701 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Idnk-204ENSMUST00000226010 1898 ntBASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Upk3bl1Q9D701 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk3bl1Q9D701 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 Spcs1-204ENSMUST00000226782 949 ntBASIC16.11■□□□□ 0.17
Upk3bl1Q9D701 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms