Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gm18666-201ENSMUST00000190039 958 ntBASIC18.86■□□□□ 0.61
Gm3404Q9D506 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3404Q9D506 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Grk6-206ENSMUST00000224995 2971 ntBASIC18.85■□□□□ 0.61
Gm3404Q9D506 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3404Q9D506 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3404Q9D506 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3404Q9D506 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3404Q9D506 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.84■□□□□ 0.61
Gm3404Q9D506 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gm3404Q9D506 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3404Q9D506 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3404Q9D506 Gm8520-201ENSMUST00000186517 868 ntBASIC18.84■□□□□ 0.61
Gm3404Q9D506 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.84■□□□□ 0.61
Gm3404Q9D506 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3404Q9D506 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Gm10138-203ENSMUST00000206952 366 ntBASIC18.83■□□□□ 0.6
Gm3404Q9D506 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.83■□□□□ 0.6
Gm3404Q9D506 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3404Q9D506 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Gm5643-201ENSMUST00000117081 966 ntBASIC18.82■□□□□ 0.6
Gm3404Q9D506 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3404Q9D506 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm3404Q9D506 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3404Q9D506 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3404Q9D506 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3404Q9D506 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms