Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.32■■□□□ 1
Taf1dQ9D4V4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Taf1dQ9D4V4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Taf1dQ9D4V4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Gm12895-201ENSMUST00000122214 226 ntBASIC21.31■■□□□ 1
Taf1dQ9D4V4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.31■■□□□ 1
Taf1dQ9D4V4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Taf1dQ9D4V4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.3■■□□□ 1
Taf1dQ9D4V4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Taf1dQ9D4V4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.3■■□□□ 1
Taf1dQ9D4V4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Taf1dQ9D4V4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.3■■□□□ 1
Taf1dQ9D4V4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.3■■□□□ 1
Taf1dQ9D4V4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Taf1dQ9D4V4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Gm18195-201ENSMUST00000207604 706 ntBASIC21.29■■□□□ 1
Taf1dQ9D4V4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Taf1dQ9D4V4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.28■■□□□ 1
Taf1dQ9D4V4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.27■■□□□ 1
Taf1dQ9D4V4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.27■■□□□ 1
Taf1dQ9D4V4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.27■■□□□ 1
Taf1dQ9D4V4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC21.27■■□□□ 1
Taf1dQ9D4V4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.27■■□□□ 1
Taf1dQ9D4V4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Taf1dQ9D4V4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Taf1dQ9D4V4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Taf1dQ9D4V4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.26■□□□□ 0.99
Taf1dQ9D4V4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Gm10052-201ENSMUST00000168019 960 ntBASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Gm7729-201ENSMUST00000050143 801 ntBASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Taf1dQ9D4V4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Gm10418-201ENSMUST00000100943 576 ntBASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Taf1dQ9D4V4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms