Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tubgcp4Q9D4F8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
Tubgcp4Q9D4F8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.93■□□□□ 0.62
Tubgcp4Q9D4F8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubgcp4Q9D4F8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubgcp4Q9D4F8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.93■□□□□ 0.62
Tubgcp4Q9D4F8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubgcp4Q9D4F8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubgcp4Q9D4F8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubgcp4Q9D4F8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tubgcp4Q9D4F8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Gm10517-202ENSMUST00000192970 758 ntBASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubgcp4Q9D4F8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubgcp4Q9D4F8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubgcp4Q9D4F8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms