Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc3Q9CW03 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.89■□□□□ 0.93
Smc3Q9CW03 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc3Q9CW03 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc3Q9CW03 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.87■□□□□ 0.93
Smc3Q9CW03 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.86■□□□□ 0.93
Smc3Q9CW03 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Gm6365-201ENSMUST00000054711 744 ntBASIC20.86■□□□□ 0.93
Smc3Q9CW03 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc3Q9CW03 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.85■□□□□ 0.93
Smc3Q9CW03 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.85■□□□□ 0.93
Smc3Q9CW03 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
Smc3Q9CW03 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc3Q9CW03 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc3Q9CW03 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc3Q9CW03 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms