Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Fcf1Q9CTH6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Fcf1Q9CTH6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Mir6982-201ENSMUST00000184354 68 ntBASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Fcf1Q9CTH6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Fcf1Q9CTH6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Fcf1Q9CTH6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fcf1Q9CTH6 Grk6-206ENSMUST00000224995 2971 ntBASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fcf1Q9CTH6 Gm11643-201ENSMUST00000119578 864 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms